species:   Artha
pid:       MI0005414
parent:    ath-MIR854c
paralog:   
locus:     5:11838096-11838316
matures:   ['GAUGAGGAUAGGGAGGAGGAG', 'UCUCUUCUACUACAGCUAUUCCG']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 5:11838096-11838316

1 out of bounds
5 alignments
0 proper strand
0 stranded perfect matches

***********************                                                                                                                                                                             *************************
CGGAUGAGGAUAGGGAGGAGGAGUAUGAUACGAGCAUGUAUCAUUUCAGUGAGCACGUACCUCCAGCGCGGGAGAGCAAGAGCUUGAGUGAAGCUCACAGAACCAACAGUAAGUUGCAGAGGUGGUGCAAGAAACAAGAUAGGCUACUUAUCAAGUGCUUCAAAGCCAUCACGUUUCUGACAGACAAGAUAAGCUGCUUCUCUUCUACUACAGCUAUUCCG
((((..((..(((((((((((((((((((((......)))))).........((((.((((((((((((......))..((((((.....))))))................))))..)))))))))).((((((..(((.((((((((...)))).......)))))))..))))))................)))))))))))).)))...))..))))
--GAUGAGGAUAGGGAGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 c
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUUCUACUACAGCUAUUCCG l=23 a=0 c*
--GAUGAGGAUAGGGAGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 ma
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUUCUACUACAGCUAUUCCG l=23 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-110111011100
fn-001
